Assessing the accuracy of contact and distance predictions in CASP14
View/Open
Cita com:
hdl:2117/355866
Document typeArticle
Defense date2021
PublisherWiley
Rights accessOpen Access
Except where otherwise noted, content on this work
is licensed under a Creative Commons license
:
Attribution-NonCommercial 3.0 Spain
Abstract
We present the results of the assessment of the intramolecular residue–residue contact and distance predictions from groups participating in the 14th round of the CASP experiment. The performance of contact prediction methods was evaluated with the measures used in previous CASPs, while distance predictions were assessed based on a new protocol, which considers individual distance pairs as well as the whole predicted distance matrix, using a graph-based framework. The results of the evaluation indicate that predictions by the tFold framework, TripletRes and DeepPotential were the most accurate in both categories. With regards to progress in method performance, the results of the assessment in contact prediction did not reveal any discernible difference when compared to CASP13. Arguably, this could be due to CASP14 FM targets being more challenging than ever before.
CitationRuiz Serra, V. [et al.]. Assessing the accuracy of contact and distance predictions in CASP14. "Proteins: Structure, Function, and Bioinformatics (Proteins)", 2021,
ISSN0887-3585
1097-0134
1097-0134
Publisher versionhttps://onlinelibrary.wiley.com/doi/10.1002/prot.26248
Collections
Files | Description | Size | Format | View |
---|---|---|---|---|
prot.26248.pdf | 3,926Mb | View/Open |