Early in 2004 the Ministry of Education and Science (Spanish Government), Generalitat de Catalunya (local Catalan Government) and Technical University of Catalonia (UPC) took the initiative of creating a National Supercomputing Center in Barcelona. BSC-CNS (Barcelona Supercomputing Center – Centro Nacional de Supercomputación) is the National Supercomputing Facility in Spain and was officially constituted in April 2005. BSC-CNS manages MareNostrum, one of the most powerful supercomputers in Europe, located at the Torre Girona chapel. The mission of BSC-CNS is to investigate, develop and manage information technology in order to facilitate scientific progress. With this aim, special dedication has been taken to areas such as Computer Sciences, Life Sciences, Earth Sciences and Computational Applications in Science and Engineering.

http://www.bsc.es/

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Recent Submissions

  • Black-Box IP Validation with the SafeTI Traffic Injector: A Success Story 

    Fuentes, Francisco; Alcaide Portet, Sergi; Casanova, Raimon; Abella Ferrer, Jaume (Institute of Electrical and Electronics Engineers (IEEE), 2023)
    Conference lecture
    Open Access
    Functional and performance validation of high-performance safety-related hardware platforms require generating specific traffic patterns in the network-on-chip (NoC) to test IP components and their integration. Software-only ...
  • TFCheckpoint database update, a cross-referencing system for transcription factors from human, mouse and rat 

    Acencio, Marcio L; Vazquez, Miguel; Chawla, Konika; Lægreid, Astrid; Kuiper, Martin (Oxford University Press, 2023-11)
    Article
    Open Access
    Prior knowledge about DNA-binding transcription factors (dbTFs), transcription co-regulators (coTFs) and general transcriptional factors (GTFs) is crucial for the study and understanding of the regulation of transcription. ...
  • Natural history of Ebola virus disease in rhesus monkeys shows viral variant emergence dynamics and tissue-specific host responses 

    Normandin, Erica; Triana, Sergio; Raju, Siddharth S.; Lan, Tammy C.T.; Lagerborg, Kim; Melé, Marta (Cell Press, 2023-11)
    Article
    Open Access
    Ebola virus (EBOV) causes Ebola virus disease (EVD), marked by severe hemorrhagic fever; however, the mechanisms underlying the disease remain unclear. To assess the molecular basis of EVD across time, we performed RNA ...
  • Taskgraph: a low contention OpenMP tasking framework 

    Yu, Chenle; Royuela Alcázar, Sara; Quiñones Moreno, Eduardo (2023-08)
    Article
    Open Access
    OpenMP is the de-facto standard for shared memory systems in High-Performance Computing (HPC). It includes a tasking model that offers a high-level of abstraction to effectively exploit structured (loop-based) and highly ...
  • WFA-GPU: Gap-affine pairwise read-alignment using GPUs 

    Aguado Puig, Quim; Doblas Font, Max; Matzoros, Christos; Espinosa Morales, Antonio; Moure López, Juan Carlos; Marco-Sola, Santiago; Moreto Planas, Miquel (2023-11-17)
    Article
    Open Access
    Motivation: Advances in genomics and sequencing technologies demand faster and more scalable analysis methods that can process longer sequences with higher accuracy. However, classical pairwise alignment methods, based on ...
  • Evaluating the spread of Omicron COVID-19 variant in Spain 

    Guzman Merino, Miguel; Marinescu, Maria-Cristina Marinescu; Cascajo, Alberto; Carretero, Jesus; Singh, David E. (Elsevier, 2023)
    Article
    Open Access
    This work analyzes the propagation the highly transmissible COVID-19 variant Omicron across Spain via simulation by using EpiGraph. EpiGraph is an agent-based parallel simulator that reproduces the COVID-19 propagation ...
  • RegulonDB v12.0: a comprehensive resource of transcriptional regulation in E. coli K-12 

    Salgado, Heladia; Gama Castro, Socorro; Lara, Paloma; Mejia Almonte, Citlalli; Alarcón Carranza, Gabriel; Capella Gutiérrez, Salvador; Gelpi, Josep (Oxford University Press, 2023)
    Article
    Open Access
    RegulonDB is a database that contains the most comprehensive corpus of knowledge of the regulation of transcription initiation of Escherichia coli K-12, including data from both classical molecular biology and high-throughput ...
  • Impact of RF waves – fast NBI ions interaction on the fusion performance in JET DTE2 campaign 

    Kirov, Krassimir K; Challis, Clive D; la Luna, Elena de; Eriksson, Jacob; Gallart, Daniel; Mantsinen, Mervi (IOP Publishing, 2023)
    Article
    Open Access
    This work studies the interaction between Radio Frequency (RF) waves used for Ion Cyclotron Resonance Heating (ICRH) and the fast Deuterium (D) and Tritium (T) Neutral Beam Injected (NBI) ions in DT plasma. The focus is ...
  • An aerosol odyssey: Navigating nutrient flux changes to marine ecosystems 

    Hamilton, Douglas; Baker, Alex; Iwamoto, Yoko; Gassó, Santiago; Bergas Massó, Elisa; Deutch, Sarah; Dinasquet, Julie; Kondo, Yoshiko; Llort Jordi, Joan; Myriokefalitakis, Stelios; Perron, Morgane; Wegman, Alex; Yoon, Joo Eun (2023-11-08)
    Article
    Open Access
    This perspective piece on aerosol deposition to marine ecosystems and the related impacts on biogeochemical cycles forms part of a larger Surface Ocean Lower Atmosphere Study status-of-the-science special edition. A large ...
  • Turbulent boundary layer in a 3-element high-lift wing: coherent structures identification 

    Montalà Sales, Ricard; Eiximeno Franch, Benet; Miró Jané, Arnau; Lehmkuhl, Oriol; Rodríguez Pérez, Ivette María (Springer, 2023)
    Part of book or chapter of book
    Restricted access - publisher's policy
    A large eddy simulation (LES) of the flow past a 30P30N high-lift three-element wing is performed at the angle of attack AoA = 9º and a Reynolds number of Re = 750,000, based on the nested chord. Results are validated ...
  • Characterization of a coherent hardware accelerator framework for SoCs 

    López Paradís, Guillem; Venu, Balaji; Armejach Sanosa, Adrià; Moreto Planas, Miquel (Springer, 2023)
    Conference report
    Restricted access - publisher's policy
    Accelerators rich architectures have become the standard in today’s SoCs. After Moore’s law diminish, it is common to only dedicate a fraction of the area of the SoC to traditional cores and leave the rest of space for ...
  • Sub-micro- and nano-sized polyethylene terephthalate deconstruction with engineered protein nanopores 

    Robles Martín, Ana; Amigot Sánchez, Rafael; Fernandez Lopez, Laura; Gonzalez Alfonso, Jose L.; Roda, Sergi; Guallar, Victor (Nature Research, 2023)
    Article
    Open Access
    The identification or design of biocatalysts to mitigate the accumulation of plastics, including sub-micro- and nano-sized polyethylene terephthalate (nPET), is becoming a global challenge. Here we computationally incorporated ...

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