The aim of this document is to study the Java EE technologies and the different kind of software projects that you can develop with, later we start an historical review of methodologies and make a justified selection of 6 agile methodologies, to compare and analysis. Another objective of this document is to identify the main tools needed to develop software and specially, with agile methodologies and Java EE technologies. The last objective of the document is to show us a practice case, where we develop a Java EE web application with two agile methodologies and its respective tools.