Computer simulations on oxidative stress-induced reactions in SARS-CoV-2 spike glycoprotein: a multi-scale approach
| dc.contributor.author | Bertran Cànovas, Òscar |
| dc.contributor.author | Martí Ballesté, Dídac |
| dc.contributor.author | Torras Costa, Juan |
| dc.contributor.author | Turon, Pau |
| dc.contributor.author | Alemán Llansó, Carlos |
| dc.contributor.group | Universitat Politècnica de Catalunya. IMEM-BRT- Innovation in Materials and Molecular Engineering - Biomaterials for Regenerative Therapies |
| dc.contributor.other | Universitat Politècnica de Catalunya. Departament de Física |
| dc.contributor.other | Universitat Politècnica de Catalunya. Doctorat en Polímers i Biopolímers |
| dc.contributor.other | Universitat Politècnica de Catalunya. Departament d'Enginyeria Química |
| dc.date.accessioned | 2022-06-13T12:21:52Z |
| dc.date.available | 2022-06-13T12:21:52Z |
| dc.date.issued | 2022-01-01 |
| dc.description.abstract | Oxidative stress, which occurs when an organism is exposed to an adverse stimulus that results in a misbalance of antioxidant and pro-oxidants species, is the common denominator of diseases considered as a risk factor for SARS-CoV-2 lethality. Indeed, reactive oxygen species caused by oxidative stress have been related to many virus pathogenicity. In this work, simulations have been performed on the receptor binding domain of SARS-CoV-2 spike glycoprotein to study what residues are more susceptible to be attacked by ·OH, which is one of the most reactive radicals associated to oxidative stress. |
| dc.description.sponsorship | J.T. acknowledges “PRACE for awarding us access to Joliot-Curie at GENCI@CEA(Irene), France, through the “PRACE support to mitigate impact of COVID-19 pandemic” call. CA acknowledges AGAUR (2017SGR359) and B. Braun Surgical, S.A.U. for fnancial support. |
| dc.description.version | Postprint (published version) |
| dc.format.extent | 13 p. |
| dc.identifier.citation | Bertran, O. [et al.]. Computer simulations on oxidative stress-induced reactions in SARS-CoV-2 spike glycoprotein: a multi-scale approach. "Molecular Diversity", 1 Gener 2022, vol. Feb, p. 1-13. |
| dc.identifier.doi | 10.1007/s11030-021-10373-6 |
| dc.identifier.issn | 1573-501X |
| dc.identifier.uri | https://hdl.handle.net/2117/368363 |
| dc.language.iso | eng |
| dc.publisher | Springer Nature |
| dc.relation.projectid | 2017sgr359 |
| dc.relation.publisherversion | https://link.springer.com/article/10.1007/s11030-021-10373-6 |
| dc.rights.access | Open Access |
| dc.rights.licensename | Attribution-NonCommercial-NoDerivatives 4.0 International |
| dc.rights.uri | http://creativecommons.org/licenses/by-nc-nd/4.0/ |
| dc.subject | Àrees temàtiques de la UPC::Matemàtiques i estadística::Investigació operativa::Simulació |
| dc.subject.lcsh | COVID-19 (Disease) |
| dc.subject.lemac | COVID-19 (Malaltia) |
| dc.subject.other | Hydrogen abstraction |
| dc.subject.other | Isoleucine |
| dc.subject.other | Molecular dynamics |
| dc.subject.other | Reactive oxygen species |
| dc.subject.other | Receptor binding domain |
| dc.subject.other | Spike protein |
| dc.title | Computer simulations on oxidative stress-induced reactions in SARS-CoV-2 spike glycoprotein: a multi-scale approach |
| dc.type | Article |
| dspace.entity.type | Publication |
| local.citation.author | Bertran, O.; Martí, D.; Torras, J.; Turon, P.; Aleman, C. |
| local.citation.endingPage | 13 |
| local.citation.publicationName | Molecular Diversity |
| local.citation.startingPage | 1 |
| local.citation.volume | Feb |
| local.identifier.drac | 32835445 |
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