Now showing items 1-3 of 3

    • An academic RISC-V silicon implementation based on open-source components 

      Abella Ferrer, Jaume; Bulla, Calvin; Cabo Pitarch, Guillem; Cazorla Almeida, Francisco Javier; Cristal Kestelman, Adrián; Doblas Font, Max; Figueras Bagué, Roger; González Trejo, Alberto; Hernández Luz, Carles; Hernández Calderón, César Alejandro; Jiménez Arador, Víctor; Kosmidis, Leonidas; Kostalampros, Ioannis-Vatistas; Langarita Benítez, Rubén; Leyva Santes, Neiel; López Paradís, Guillem; Marimon Illana, Joan; Martínez Martínez, Ricardo; Mendoza Escobar, Jonnatan; Moll Echeto, Francisco de Borja; Moreto Planas, Miquel; Pavón Rivera, Julián; Ramírez Lazo, Cristóbal; Ramírez Salinas, Marco Antonio; Rojas Morales, Carlos; Rubio Sola, Jose Antonio; Ruiz, Abraham Josafat; Sonmez, Nehir; Soria Pardos, Víctor; Teres Teres, Lluis; Unsal, Osman Sabri; Valero Cortés, Mateo; Vargas Valdivieso, Iván; Villa Vargas, Luis Alfonso (Institute of Electrical and Electronics Engineers (IEEE), 2020)
      Conference report
      Open Access
      The design presented in this paper, called preDRAC, is a RISC-V general purpose processor capable of booting Linux jointly developed by BSC, CIC-IPN, IMB-CNM (CSIC), and UPC. The preDRAC processor is the first RISC-V ...
    • Compressed sparse FM-index: Fast sequence alignment using large K-steps 

      Langarita Benítez, Rubén; Armejach Sanosa, Adrià; Setoain, Javier; Ibáñez Marín, Pablo Enrique; Alastruey Benedé, Jesús; Moreto Planas, Miquel (2020-06-05)
      Article
      Open Access
      The FM-index is a data structure used in genomics for exact search of input sequences over large reference genomes. Algorithms based on the FM-index show an irregular memory access pattern, resulting in a memory bound ...
    • Evaluation of genome alignment workflows on HPC processors 

      Langarita Benítez, Rubén (Universitat Politècnica de Catalunya, 2021-01-22)
      Master thesis
      Open Access
      Precision medicine holds promise for improving healthcare by leveraging genomic information. Due to the steep decrease in genome sequencing costs in recent years, the amount of data to be processed is increasing dramatically, ...