Browsing by Author "Kedzierska, A.M."

Now showing items 1-3 of 3

    • GenNon-h: Generating multiple sequence alignments on nonhomogeneous phylogenetic trees 

      Kedzierska, A.M.; Casanellas Rius, Marta (2012-08-28)
      Article
      Open Access
      Background: A number of software packages are available to generate DNA multiple sequence alignments (MSAs) evolved under continuous-time Markov processes on phylogenetic trees. On the other hand, methods of simulating the ...

    • SPIn: model selection for phylogenetic mixtures via linear invariants 

      Kedzierska, A.M.; Drton, M.; Guigó, Roderic; Casanellas Rius, Marta (2011-10)
      Article
      Restricted access - publisher's policy
      In phylogenetic inference, an evolutionarymodel describes the substitution processes along each edge of a phylogenetic tree. Misspecification of the model has important implications for the analysis of phylogenetic data. ...

    • The space of phylogenetic mixtures for equivariant models 

      Casanellas Rius, Marta; Fernández Sánchez, Jesús; Kedzierska, A.M. (2012-11-28)
      Article
      Open Access
      The selection of the most suitable evolutionary model to analyze the given molecular data is usually left to biologist's choice. In his famous book, J Felsenstein suggested that certain linear equations satisfied by the ...