Exploració per tema "Genomics"
Ara es mostren els items 21-40 de 118
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Building from scratch: de novo gene birth
(Barcelona Supercomputing Center, 2019)
Altres
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Challenges and opportunities for RISC-V architectures towards genomics-based workloads
(Springer, 2023)
Capítol de llibre
Accés obertThe use of large-scale supercomputing architectures is a hard requirement for scientific computing Big-Data applications. An example is genomics analytics, where millions of data transformations and tests per patient need ... -
Chromatin 3D organization revealed by chromatin networks: gene-regulation, replication, and beyond
(Barcelona Supercomputing Center, 2019)
Altres
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Chromatin profiling reveals heterogeneity in clinical isolates of the human pathogen Aspergillus fumigatus
(Public Library of Science, 2022-01)
Article
Accés obertInvasive Pulmonary Aspergillosis, which is caused by the filamentous fungus Aspergillus fumigatus, is a life-threatening infection for immunosuppressed patients. Chromatin structure regulation is important for genome ... -
Chromosome-level assemblies from diverse clades reveal limited structural and gene content variation in the genome of Candida glabrata
(BioMed Central (BMC), 2022)
Article
Accés obertBackground Candida glabrata is an opportunistic yeast pathogen thought to have a large genetic and phenotypic diversity and a highly plastic genome. However, the lack of chromosome-level genome assemblies representing ... -
Class c gpcr metabotropic glutamate receptors subtype discrimination using computation intelligence methods
(Universitat Politècnica de Catalunya, 2014-11-16)
Projecte Final de Màster Oficial
Accés obert -
Comparing assembly strategies for third-generation sequencing technologies across different genomes
(Elsevier, 2023-09)
Article
Accés obertThe recent advent of long-read sequencing technologies, such as Pacific Biosciences (PacBio) and Oxford Nanopore technology (ONT), has led to substantial accuracy and computational cost improvements. However, de novo ... -
Complex networks in genomics and proteomics
(Wiley-VCH, 2003)
Capítol de llibre
Accés restringit per política de l'editorialComplex interacting networks are observed in systems from such diverse areas as physics, biology, economics, ecology, and computer science. For example, economic or social interactions often organize themselves in complex ... -
Compressed sparse FM-index: Fast sequence alignment using large K-steps
(2022-01-01)
Article
Accés obertThe FM-index is a data structure used in genomics for exact search of input sequences over large reference genomes. Algorithms based on the FM-index show an irregular memory access pattern, resulting in a memory bound ... -
Compression-based classification of biological sequences and structures via the Universal Similarity Metric: experimental assessment
(2007-07)
Article
Accés obertSimilarity of sequences is a key mathematical notion for Classification and Phylogenetic studies in Biology. It is currently primarily handled using alignments. However, the alignment methods seem inadequate for post-genomic ... -
Computational approaches for personalised medicine: from crowdsourced machine learning to dynamic mechanistic models
(Barcelona Supercomputing Center, 2019)
Altres
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Considerations in using OpenCL on GPUs and FPGAs for throughput-oriented genomics workloads
(Elsevier, 2019-05)
Article
Accés obertThe recent upsurge in the available amount of health data and the advances in next-generation sequencing are setting the ground for the long-awaited precision medicine. To process this deluge of data, bioinformatics workloads ... -
Considerations in using OpenCL on GPUs and FPGAs for throughput-oriented genomics workloads
(Elsevier, 2019-05)
Article
Accés obertThe recent upsurge in the available amount of health data and the advances in next-generation sequencing are setting the ground for the long-awaited precision medicine. To process this deluge of data, bioinformatics workloads ... -
Creation of a domain specific language to manage bioinformatic tasks
(Universitat Politècnica de Catalunya, 2020-01-16)
Treball Final de Grau
Accés restringit per acord de confidencialitat -
Critical analysis and comparison of data protection techniques for genomics data sets
(Universitat Politècnica de Catalunya, 2016-07-04)
Projecte Final de Màster Oficial
Accés obertThis work reviews the current literature on protecting genomic information. The goal is to provide insight on how to define a secure file format for such data. We compare the published ideas to the requirements defined by ... -
Culture expansion of CAR T cells results in aberrant DNA methylation that is associated with adverse clinical outcome
(Springer Nature, 2023)
Article
Accés obertChimeric antigen receptor (CAR) T cells provide new perspectives for treatment of hematological malignancies. Manufacturing of these cellular products includes culture expansion procedures, which may affect cellular integrity ... -
Data as a Service (DaaS) for sharing and processing of large data collections in the cloud
(Institute of Electrical and Electronics Engineers (IEEE), 2013)
Text en actes de congrés
Accés obertData as a Service (DaaS) is among the latest kind of services being investigated in the Cloud computing community. The main aim of DaaS is to overcome limitations of state-of-the-art approaches in data technologies, according ... -
Deep learning on genomics using NLP-oriented algorithms
(Universitat Politècnica de Catalunya, 2023-06-30)
Projecte Final de Màster Oficial
Accés obertThis work provides a DNABERT-based solution inspired by NLP for the phage-bateria interaction (PBI) problem, as well as comprehensive literature review on the applied Deep Learning (DL) techniques. Intuitively, DNABERT is ... -
Desenvolupament d'una aplicació per autoritzar l'accés a informació genòmica protegida
(Universitat Politècnica de Catalunya, 2021-06-29)
Treball Final de Grau
Accés restringit per acord de confidencialitat -
Design and implementation of reference software for MPEG-G genomic information protection
(Universitat Politècnica de Catalunya, 2021-10-27)
Projecte Final de Màster Oficial
Accés obertGenetic data is the most accurate definition of a human being, giving a complete image of a body. It is a very critical information which offers a new field of study, a great opportunity to improve our knowledge in the ...