Now showing items 1-13 of 13

    • A Brownian Ratchet Model Explains the Biased Sidestepping of Single-Headed Kinesin-3 KIF1A 

      Mitra, Aniruddha; Suñé, Marc; Diez, Stefan; Sancho Herrero, José Maria; Oriola Santandreu, David; Casademunt Viader, Jaume (2019-06-18)
      Article
      Open Access
      The kinesin-3 motor KIF1A is involved in long-ranged axonal transport in neurons. To ensure vesicular delivery, motors need to navigate the microtubule lattice and overcome possible roadblocks along the way. The single-headed ...
    • Active forces shape the metaphase spindle through a mechanical instability 

      Oriola Santandreu, David; Jülicher, Frank; Brugués, Jan (2020-07-14)
      Article
      Open Access
      The metaphase spindle is a dynamic structure orchestrating chromosome segregation during cell division. Recently, soft matter approaches have shown that the spindle behaves as an active liquid crystal. Still, it remains ...
    • Autocatalytic microtubule nucleation determines the size and mass of Xenopus laevis egg extract spindles 

      Decker, Franziska; Oriola Santandreu, David; Dalton, Benjamin; Brugués, Jan (2018-01-11)
      Article
      Open Access
      Regulation of size and growth is a fundamental problem in biology. A prominent example is the formation of the mitotic spindle, where protein concentration gradients around chromosomes are thought to regulate spindle growth ...
    • Convocatòria Extraordinària 2023-2024, Física II 

      Oriola Santandreu, David (Universitat Politècnica de Catalunya, 2024-06-18)
      Exam
      Restricted access to the UPC academic community
    • Cooperative action of KIF1A Brownian motors with finite dwell time 

      Oriola Santandreu, David; Casademunt Viader, Jaume (2014-03-31)
      Article
      Open Access
      We study in detail the cooperative action of small groups of KIF1A motors in its monomeric (single-headed) form within an arrangement relevant to vesicle traffic or membrane tube extraction. It has been recently shown that ...
    • Cooperative Force Generation of KIF1A Brownian Motors 

      Oriola Santandreu, David; Casademunt Viader, Jaume (American Institute of Physics (AIP), 2013-07-26)
      Article
      Open Access
      KIF1A is a kinesin motor protein that can work processively in a monomeric (single-headed) form by using a noise-driven ratchet mechanism. Here, we show that the combination of a passive diffusive state and finite-time ...
    • Engineering life in synthetic systems 

      Oriola Santandreu, David; Spagnoli, Francesca (2021-07-12)
      Article
      Open Access
      The second EMBO-EMBL Symposium ‘Synthetic Morphogenesis: From Gene Circuits to Tissue Architecture’ was held virtually in March 2021, with participants from all over the world joining from the comfort of their sofas to ...
    • Examen Final 2023-2024, Física II 

      Oriola Santandreu, David (Universitat Politècnica de Catalunya, 2024-06-24)
      Exam
      Restricted access to the UPC academic community
    • Fluidization and Active Thinning by Molecular Kinetics in Active Gels 

      Oriola Santandreu, David; Alert, Ricard; Casademunt Viader, Jaume (American Institute of Physics (AIP), 2017-02-24)
      Article
      Open Access
      We derive the constitutive equations of an active polar gel from a model for the dynamics of elastic molecules that link polar elements. Molecular binding kinetics induces the fluidization of the material, giving rise to ...
    • Formation of helical membrane tubes around microtubules by single-headed kinesin KIF1A 

      Oriola Santandreu, David; Roth, Sophie; Dogterom, Marileen; Casademunt Viader, Jaume (2015-08-13)
      Article
      Open Access
      The kinesin-3 motor KIF1A is in charge of vesicular transport in neuronal axons. Its single-headed form is known to be very inefficient due to the presence of a diffusive state in the mechanochemical cycle. However, recent ...
    • Nonlinear amplitude dynamics in flagellar beating 

      Oriola Santandreu, David; Casademunt Viader, Jaume; Bloomfield-Gadêlha, Hermes (2017-03-08)
      Article
      Open Access
      The physical basis of flagellar and ciliary beating is a major problem in biology which is still far from completely understood. The fundamental cytoskeleton structure of cilia and flagella is the axoneme, a cylindrical ...
    • Rethinking embryology in vitro: A synergy between engineering, data science and theory 

      Gritti, Nicola; Oriola Santandreu, David; Trivedi, Vikas (2021-06)
      Article
      Open Access
      Pluripotent stem cells, in the recent years, have been demonstrated to mimic different aspects of metazoan embryonic development in vitro. This has led to the establishment of synthetic embryology: a field that makes use ...
    • Single-cell Bayesian deconvolution 

      Torregrosa Cortés, Gabriel; Oriola Santandreu, David; Trivedi, Vikas; García Ojalvo, Jordi (Elsevier, 2023-10-20)
      Article
      Open Access
      Individual cells exhibit substantial heterogeneity in protein abundance and activity, which is frequently reflected in broad distributions of fluorescently labeled reporters. Since all cellular components are intrinsically ...