Now showing items 1-7 of 7

    • Algoritmo de búsqueda de secuencias cis-regulatorias basado en el análisis del incremento de la información mediante la divergencia de Rényi 

      Maynou Fernández, Joan; Vallverdú Ferrer, Montserrat; Caminal Magrans, Pere; Perera Lluna, Alexandre (2011)
      Conference lecture
      Open Access
    • Caracterización y análisis de las interacciones de regulación entre los factores de transcripción y los genes 

      Maynou Fernández, Joan; Pairó Castiñeira, Erola; Massanet Vila, Raimon; Vallverdú Ferrer, Montserrat; Caminal Magrans, Pere; Perera Lluna, Alexandre (2011)
      Conference report
      Open Access
      El estudio y la comprensión de las redes de interacción entre proteínas es fundamental para entender el funcionamiento de los diferentes procesos biológicos a nivel celular. El conjunto de interacciones entre proteínas, ...
    • Detection of transcription factor binding sites using Rényi entropy 

      Maynou Fernández, Joan; Vallverdú Ferrer, Montserrat; Clarià, Francesc; Perera Lluna, Alexandre; Caminal Magrans, Pere (IEEE Press. Institute of Electrical and Electronics Engineers, 2008)
      Conference report
      Open Access
      During the process of protein synthesis, transcription of DNA to messenger RNA starts with the binding of the transcription factors to the promoter. One of the issues on the prediction of transcription factor binding is ...
    • MEET: Motif Elements Estimation Toolki 

      Pairó Castiñeira, Erola; Maynou Fernández, Joan; Vallverdú Ferrer, Montserrat; Gallardo Chacón, Joan Josep; Caminal Magrans, Pere; Marco Colás, Santiago; Perera Lluna, Alexandre (2010)
      Conference lecture
      Open Access
      MEET (Motif Elements Estimation Toolkit) es un paquete en R que integra un conjunto de algoritmos para la detección computacional de los puntos de unión de los factores de transcripción (TFBS). El paquete en R MEET incluye ...
    • MEET: Motif Elements Estimation Toolkit 

      Pairó Castiñeira, Erola; Maynou Fernández, Joan; Vallverdú Ferrer, Montserrat; Caminal Magrans, Pere; Marco Colás, Santiago; Perera Lluna, Alexandre (2012)
      Conference lecture
      Open Access
      MEET is an R package that integrates a set of algorithms for the detection of transcription factor binding sites(TFBS). The MEET R package includes five motif searching algorithms: MEME/MAST(Multiple Expectation-Maximization ...
    • Sequence information gain based motif analysis 

      Maynou Fernández, Joan; Pairó, Erola; Marco, Santiago; Perera Lluna, Alexandre (2015-11-09)
      Article
      Open Access
      Background: The detection of regulatory regions in candidate sequences is essential for the understanding of the regulation of a particular gene and the mechanisms involved. This paper proposes a novel methodology based ...
    • Transcription factor binding site detection through position cross-mutual information variability analysis 

      Maynou Fernández, Joan; Vallverdú Ferrer, Montserrat; Clarià Sancho, Francesc; Gallardo Chacón, Joan Josep; Caminal Magrans, Pere; Perera Lluna, Alexandre (IEEE Press. Institute of Electrical and Electronics Engineers, 2009)
      Conference lecture
      Open Access
      Regulatory sequence detection is a fundamental challenge in computational biology. One key process in protein synthesis starts with the binding of the transcription factor to its binding site. Different sites can show ...