• COVID-19 Flow-Maps an open geographic information system on COVID-19 and human mobility for Spain 

      Ponce De Leon, Miguel; Valle, Javier del; Fernández González, Jose María; Bernardo, Marc; Cirillo, Davide; Sanchez Valle, Jon; Smith, Matthew; Capella Gutiérrez, Salvador; Gullón, Tania; Valencia, Alfonso (Nature Research, 2021)
      Article
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      COVID-19 is an infectious disease caused by the SARS-CoV-2 virus, which has spread all over the world leading to a global pandemic. The fast progression of COVID-19 has been mainly related to the high contagion rate of the ...
    • FAIRification of genomic track metadata [version 1; peer review: 2 approved] 

      Gundersen, Sveinung; Boddu, Sanjay; Capella Gutiérrez, Salvador; Drabløs, Finn; Fernández González, Jose María; Kompova, Radmila; Taylor, Kieron; Titov, Dmytro; Zerbino, Daniel; Hovig, Eivind (F1000 Research, 2021)
      Article
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      Background: Many types of data from genomic analyses can be represented as genomic tracks, i.e. features linked to the genomic coordinates of a reference genome. Examples of such data are epigenetic DNA methylation data, ...
    • The eTRANSAFE project on translational safety assessment through integrative knowledge management: achievements and perspectives 

      Pognan, François; Steger-Hartmann, Thomas; Díaz, Carlos; Blomberg, Niklas; Bringezu, Frank; Briggs, Katharine; Callegaro, Giulia; Capella Gutiérrez, Salvador; Centeno, Emilio; Corvi, Javier; Drew, Philip; Drewe, William C.; Fernández González, Jose María; Furlong, Laura I.; Guney, Emre; Kors, Jan A.; Mayer, Miguel Angel; Pastor, Manuel; Piñero, Janet; Ramírez-Anguita, Juan Manuel; Ronzano, Francesco; Rowell, Philip; Saüch-Pitarch, Josep; Valencia, Alfonso; Water, Bob van de; Lei, Johan van der; Mulligen, Erik van; Sanz, Ferran (MDPI, 2021)
      Article
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      eTRANSAFE is a research project funded within the Innovative Medicines Initiative (IMI), which aims at developing integrated databases and computational tools (the eTRANSAFE ToxHub) that support the translational safety ...
    • The quest for orthologs benchmark service and consensus calls in 2020 

      Altenhoff, Adrian M; Garrayo Ventas, Javier; Consentino, Salvatore; Emms, David; Glover, Natasha M; Hernández Plaza, Ana; Nevers, Yannis; Szklarczyk, Damian; Fernández González, Jose María; Codó, Laia; Gelpi, Josep; Huertas Cepas, Jaime; Iwasaki, Wataru; Kelly, Steven; Lecompte, Odile; Muffato, Matthieu; Martín, María Jesús; Capella Gutiérrez, Salvador; Thomas, Paul D.; Sonnhammer, Erik; Dessimoz, Christophe; the Quest for Orthologs Consortium (Oxford University Press (OUP), 2020-05-06)
      Article
      Accés obert
      The identification of orthologs—genes in different species which descended from the same gene in their last common ancestor—is a prerequisite for many analyses in comparative genomics and molecular evolution. Numerous ...