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dc.contributor.authorAlonso-Alemany, Daniel
dc.contributor.authorClemente, José C.
dc.contributor.authorJansson, Jesper
dc.contributor.authorValiente Feruglio, Gabriel Alejandro
dc.contributor.otherUniversitat Politècnica de Catalunya. Departament de Llenguatges i Sistemes Informàtics
dc.date.accessioned2012-07-18T10:22:39Z
dc.date.available2012-07-18T10:22:39Z
dc.date.created2011-12-01
dc.date.issued2011-12-01
dc.identifier.citationAlonso-Alemany, D. [et al.]. Taxonomic assignment in metagenomics with TANGO. "EMBnet.journal", 01 Desembre 2011, vol. 17, núm. 2, p. 46-50.
dc.identifier.issn1023-4144
dc.identifier.urihttp://hdl.handle.net/2117/16286
dc.description.abstractOne of the main computational challenges facing metagenomic analysis is the taxonomic identification of short DNA fragments. The combination of sequence alignment methods with taxonomic assignment based on consensus can provide an accurate estimate of the microbial diversity in a sample. In this note, we show how recent improvements to these consensus methods, as implemented in the latest release of the TANGO tool, can provide an improved estimate of diversity in simulated datasets.
dc.format.extent5 p.
dc.language.isoeng
dc.rightsAttribution-NonCommercial-NoDerivs 3.0 Spain
dc.rights.urihttp://creativecommons.org/licenses/by-nc-nd/3.0/es/
dc.subjectÀrees temàtiques de la UPC::Informàtica::Aplicacions de la informàtica::Bioinformàtica
dc.subject.lcshMetagenomics
dc.subject.lcshTaxonomic assignment
dc.titleTaxonomic assignment in metagenomics with TANGO
dc.typeArticle
dc.subject.lemacMetagenòmica
dc.subject.lemacTANGO
dc.contributor.groupUniversitat Politècnica de Catalunya. ALBCOM - Algorismia, Bioinformàtica, Complexitat i Mètodes Formals
dc.description.peerreviewedPeer Reviewed
dc.relation.publisherversionhttp://journal.embnet.org/index.php/embnetjournal/article/view/237/531
dc.rights.accessOpen Access
local.identifier.drac9466783
dc.description.versionPostprint (published version)
local.citation.authorAlonso-Alemany, D.; Clemente, J.; Jansson, J.; Valiente, G.
local.citation.publicationNameEMBnet.journal
local.citation.volume17
local.citation.number2
local.citation.startingPage46
local.citation.endingPage50


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