• MEET: Motif Elements Estimation Toolki 

      Pairó Castiñeira, Erola; Maynou Fernández, Joan; Vallverdú Ferrer, Montserrat; Gallardo Chacón, Joan Josep; Caminal Magrans, Pere; Marco Colás, Santiago; Perera Lluna, Alexandre (2010)
      Comunicació de congrés
      Accés obert
      MEET (Motif Elements Estimation Toolkit) es un paquete en R que integra un conjunto de algoritmos para la detección computacional de los puntos de unión de los factores de transcripción (TFBS). El paquete en R MEET incluye ...
    • MEET: Motif Elements Estimation Toolkit 

      Pairó Castiñeira, Erola; Maynou Fernández, Joan; Vallverdú Ferrer, Montserrat; Caminal Magrans, Pere; Marco Colás, Santiago; Perera Lluna, Alexandre (2012)
      Comunicació de congrés
      Accés obert
      MEET is an R package that integrates a set of algorithms for the detection of transcription factor binding sites(TFBS). The MEET R package includes five motif searching algorithms: MEME/MAST(Multiple Expectation-Maximization ...
    • Sequence information gain based motif analysis 

      Maynou Fernández, Joan; Pairó, Erola; Marco, Santiago; Perera Lluna, Alexandre (2015-11-09)
      Article
      Accés obert
      Background: The detection of regulatory regions in candidate sequences is essential for the understanding of the regulation of a particular gene and the mechanisms involved. This paper proposes a novel methodology based ...
    • Transcription factor binding site detection through position cross-mutual information variability analysis 

      Maynou Fernández, Joan; Vallverdú Ferrer, Montserrat; Clarià Sancho, Francesc; Gallardo Chacón, Joan Josep; Caminal Magrans, Pere; Perera Lluna, Alexandre (IEEE Press. Institute of Electrical and Electronics Engineers, 2009)
      Comunicació de congrés
      Accés obert
      Regulatory sequence detection is a fundamental challenge in computational biology. One key process in protein synthesis starts with the binding of the transcription factor to its binding site. Different sites can show ...