Now showing items 1-2 of 2

  • Reference databases for taxonomic assignment in metagenomics 

    Santamaria, Monica; Fosso, Bruno; Consiglio, Arianna; De Caro, Giorigio; Grillo, Giorgio; Licciulli, Flavio; Liuni, Sabino; Marzano, Marinella; Alonso-Alemany, Daniel; Valiente Feruglio, Gabriel Alejandro; Pesole, Graziano (2012-11)
    Article
    Restricted access - publisher's policy
    Metagenomics is providing an unprecedented access to the environmental microbial diversity. The amplicon-based metagenomics approach involves the PCR-targeted sequencing of a genetic locus fitting different features. Namely, ...
  • Taxonomic assignment in metagenomics with TANGO 

    Alonso-Alemany, Daniel; Clemente, José C.; Jansson, Jesper; Valiente Feruglio, Gabriel Alejandro (2011-12-01)
    Article
    Open Access
    One of the main computational challenges facing metagenomic analysis is the taxonomic identification of short DNA fragments. The combination of sequence alignment methods with taxonomic assignment based on consensus can ...